Posted 2009-06-01
Biocluster Scheduled Reboot has completed. All serviced are running.
Posted 2009-05-14 |
The scheduled reboot began on Saturday May 30th 2009
- What should I do?
Please terminate all cluster tasks before Saturday May 30th 2009
The shutdown will happen on night of Friday -> Saturday
- When will the cluster be available again?
Late Sunday May 31st Monday morning May 1st 2009.
- What nodes will be rebooted?
- biocluster
- owl
- all cluster nodes
- Will there be changes to the user software?
- No
- Will the `/scratch` folders be cleared out on the cluster nodes?
- Yes
Posted 2009-04-10
Version 2 of the Running multiple scripts on Biocluster - a method for running parallel tasks
Posted 2009-03-13
- Illumina's data analysis tools installed.
On Biocluster, Owl, and all compute nodes, it's located in /opt/illumina-GAPipeline-1.3.2/bin/
2009-03-19 |
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2009-03-08 |
The Cron manual says that the Daylight Savings Time (DST) is taken care of, but the automatic backup did not run on night of March 8th. It was scheduled to run 2:16 AM. Due to DTS the system clock shifted from 2AM to 3AM. No errors were logged. The only sensible explanation for the skipped backup is the DST shift. From this, I can predict that at the end of DST, when the clock shifts back from 2AM to 1AM, the tasks that are scheduled at 1:xx AM will try to run twice. As a new rule, I do not recommend scheduling important cron tasks between 1 AM and 3 AM. |
2009-02-12 |
Running Computational Tasks on Biocluster is now completely revised. |
2009-02-04 |
Using NAMD documented. |
2009-01-30 |
Published research results on |
2009-01-20 |
Installed the new consed Version 18.0 (090108). On Biocluster documentation and samples are located in /opt/phred-phrap-consed/ |